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Questions - iranges

How to convert factor Rle to order perserved string list? R

Ok so I have an object and I recovered a factor-RLE that looks sort of like this: x <- rle(c(1,1,1,2,2,3,4,4,4)) and I would want to do something to x such that this returned: 1 1 1 2 2 3 4 4 4 M...
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Sky Scraper

r

extract

rle

iranges

Votes: 0

Answers: 0

R: How do I reduce the ranges of genes into a single vector?

I created var_nt dataframe by subsetting tx_df columns based on row variant - "J3", "J10", "J11", "J13". Then, I converted the var_nt dataframe to a GRanges obj...
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melolili

r

dataframe

bioinformatics

bioconductor

iranges

Votes: 0

Answers: 1

Latest Answer

On each iteration, you are inadvertently rewriting over the same object, repeatedly. Instead, you can iterate over the values in gene.list$entrez using lapply varnt_grange.nt =lapply(gene.list$entrez,...
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langtang

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