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Questions - sequencing

How can I convert Affymetrix probes into gene Symbols?

I have carried out Affymetrix data analysis with oligo and limma. Now I need to perform the gene enrichment analysis on the upregulated and downregulated genes (on EnrichR, by searching the gene symbo...
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Martina M

r

bioinformatics

genetic-algorithm

genetic-programming

sequencing

Votes: 0

Answers: 2

Latest Answer

Here is a an approach that uses the biomaRt package to query the ensembl database. library(biomaRt) probes <- c("1007_s_at", "1053_at", "117_at", "12...
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Stefano Barbi

Haskell &gt;&gt; operator with two lists

For a college assignment I am learning Haskell and when reading about the do-notation and sequencing with >>= and >> I came across this behaviour that I did not expect. [1,2,3] >> [1...
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Sebastiaan Steenbrink

list

haskell

monads

ghci

sequencing

Votes: 0

Answers: 3

Latest Answer

The “result” is in this case the values contained in [1,2,3], which are indeed ignored. What >> does not ignore is the context, which for the list monad is the shape (i.e. length) of the list. T...
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leftaroundabout

Binary search between two files in C

I'm trying to apply some previously written code to some DNA sequencing data that I have collected. I would like to match my sequencing reads to a document containing specific barcodes and output the ...
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Joe Armstrong

c

monkey

sequencing

Votes: 0

Answers: 1

Latest Answer

Your problem is here: fp = fopen(fname, "MOBYtest"); that's not how you call fopen(). If you look at the man page for fopen() you'll see the signature: FILE *fopen(const char *pathname, con...
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