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Questions - hdf5

HDF5 makes a problem after brew update & upgrade

I'm M1 user and coding on python 3.9.10 up to now. I try updating lib. with homebrew, especially for python 3.9.12 and HDF5. Also I reinstalled h5py. Here I tried. brew update & upgrade brew reins...
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navian

python

homebrew

hdf5

h5py

Votes: 0

Answers: 2

Latest Answer

The following worked for me. First, uninstall h5py and hdf5 (also deleted my pip cache, but not sure how relevant this is). Then just run > brew install hdf5 > export HDF5_DIR="$(brew --pre...
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Sito

How to include keras model in R package?

I am building an R package and I would like to include a pretrained keras model (in hdf5 format) in it. I am wondering, how to do so correctly. I found many examples of data included within the packag...
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ramen

r

keras

package

hdf5

Votes: 0

Answers: 1

Latest Answer

You can place files with any format in the 'inst' folder, and then access them at runtime from R code with system.file() For example, place the h5 file in "package_name/inst/pretrained-models/mod...
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t-kalinowski

Python "tables" module "Not Found", but PIP and Conda say it is installed

I'm getting two errors in tandem when trying to export a Pandas DataFrame to HDF5 on M1 Mac: Traceback (most recent call last): File "/Library/Frameworks/Python.framework/Versions/3.10/lib/pytho...
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KCpremo

python

pandas

hdf5

python-module

pytables

Votes: 0

Answers: 1

Latest Answer

Read error messages closely. You have 2 Python installations. They are different versions, and probably have different packages installed. First message references /Library/Frameworks/Python.framework...
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kcw78

how to properly project a rast object if extent information is missing?

I'm trying to read a HDF5 file with terra, but the extent of the grid could not be read. > rst <- terra::rast("temp.h5") Warning message: [rast] unknown extent > rst ...
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knstr

r

gis

hdf5

hdf

terra

Votes: 0

Answers: 1

Latest Answer

The metadata show that the CRS is stereographic, this not lon/lat. We can set it like this (note that I added the "+units=km" based on the values of a and b p <- "+proj=stere +lat_0=...
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Robert Hijmans

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